Outputs¶
Unknown¶
The directory named unknown
in the output directory is populated by NIFTI images
that could not be identified. Files in this directory are generally named following
this convention: sub-<label>[ses-<label>]_run-<label>_unknown.nii.gz
, as shown in
the example below (assuming that this study only had one session).
Output_Directory
├── sub-001
├── sub-002
.
.
.
├── unknown
| ├── sub-001_ses-001_run-01_unknown.json
| ├── sub-001_ses-001_run-01_unknown.nii.gz
| ├── sub-001_ses-001_run-02_unknown.json
| └── sub-001_ses-001_run-02_unknown.nii.gz
├──.bidsignore
└──.misc
.misc¶
The .misc
directory contains miscellaneous files that pertain to the image conversion
process, such as log files (as shown below).
Output_Directory
├── sub-001
├── sub-002
.
.
.
├── unknown
├──.bidsignore
└──.misc
└── convert_source.log
.bidsignore¶
The .bidsignore
file is generated and intended for BIDS validation
after data conversion. This file acts similarly to the .gitignore
file - meaning files that should be ignored in the output BIDS directory
should have their filenames written to this file. For example:
# .bidsignore file
unknown
.misc
The unknown
and .misc
directories are not BIDS valid directories and as such,
would likely throw errors during BIDS validation.